Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LtbrP50284 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LtbrP50284 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.3□□□□□ -0.12
LtbrP50284 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.3□□□□□ -0.12
LtbrP50284 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LtbrP50284 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LtbrP50284 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.29□□□□□ -0.12
LtbrP50284 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC14.29□□□□□ -0.12
LtbrP50284 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC14.29□□□□□ -0.12
LtbrP50284 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.29□□□□□ -0.12
LtbrP50284 Gm13937-201ENSMUST00000121000 988 ntBASIC14.29□□□□□ -0.12
LtbrP50284 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gm28388-201ENSMUST00000186262 437 ntBASIC14.29□□□□□ -0.12
LtbrP50284 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gm44329-201ENSMUST00000197469 112 ntBASIC14.29□□□□□ -0.12
LtbrP50284 Gm9111-201ENSMUST00000219394 709 ntBASIC14.29□□□□□ -0.12
LtbrP50284 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LtbrP50284 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LtbrP50284 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LtbrP50284 Gm25201-201ENSMUST00000083093 170 ntBASIC14.29□□□□□ -0.12
LtbrP50284 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LtbrP50284 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.29□□□□□ -0.12
LtbrP50284 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LtbrP50284 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LtbrP50284 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LtbrP50284 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LtbrP50284 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.28□□□□□ -0.12
LtbrP50284 Gm5708-201ENSMUST00000196289 886 ntBASIC14.28□□□□□ -0.12
LtbrP50284 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Gm5298-201ENSMUST00000201122 892 ntBASIC14.28□□□□□ -0.12
LtbrP50284 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LtbrP50284 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Gm10288-201ENSMUST00000084614 537 ntBASIC14.28□□□□□ -0.12
LtbrP50284 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LtbrP50284 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.27□□□□□ -0.12
LtbrP50284 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LtbrP50284 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LtbrP50284 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.27□□□□□ -0.12
LtbrP50284 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LtbrP50284 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LtbrP50284 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LtbrP50284 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LtbrP50284 Gm7278-201ENSMUST00000119836 1401 ntBASIC14.27□□□□□ -0.12
LtbrP50284 Gm14724-201ENSMUST00000118400 537 ntBASIC14.27□□□□□ -0.13
LtbrP50284 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LtbrP50284 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.27□□□□□ -0.13
LtbrP50284 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.27□□□□□ -0.13
LtbrP50284 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.27□□□□□ -0.13
LtbrP50284 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms