Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.91□□□□□ -0.66
Rfx3P48381 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.9□□□□□ -0.66
Rfx3P48381 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Gm10434-201ENSMUST00000101158 471 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Mir1247-201ENSMUST00000116706 82 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Gm13342-201ENSMUST00000121055 207 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.9□□□□□ -0.66
Rfx3P48381 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rfx3P48381 Gm44958-201ENSMUST00000203734 736 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Gm44882-201ENSMUST00000205702 802 ntBASIC10.9□□□□□ -0.66
Rfx3P48381 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Rfx3P48381 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Rfx3P48381 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rfx3P48381 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.9□□□□□ -0.66
Rfx3P48381 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rfx3P48381 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.9□□□□□ -0.67
Rfx3P48381 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.89□□□□□ -0.67
Rfx3P48381 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Gm6023-201ENSMUST00000118217 606 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 Gm12058-201ENSMUST00000118614 437 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 Gm9083-201ENSMUST00000120423 819 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Gm17420-201ENSMUST00000164753 153 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.89□□□□□ -0.67
Rfx3P48381 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.89□□□□□ -0.67
Rfx3P48381 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.89□□□□□ -0.67
Rfx3P48381 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfx3P48381 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfx3P48381 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Rfx3P48381 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfx3P48381 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rfx3P48381 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfx3P48381 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms