Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rfx2P48379 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.67□□□□□ -0.38
Rfx2P48379 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Gm22902-201ENSMUST00000158488 302 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rfx2P48379 Gm25732-201ENSMUST00000175168 60 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Gm42997-202ENSMUST00000200321 985 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.66□□□□□ -0.38
Rfx2P48379 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rfx2P48379 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rfx2P48379 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Rfx2P48379 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Rfx2P48379 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Rfx2P48379 Gm28071-201ENSMUST00000190355 478 ntBASIC12.65□□□□□ -0.38
Rfx2P48379 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.65□□□□□ -0.38
Rfx2P48379 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Rfx2P48379 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rfx2P48379 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Rfx2P48379 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx2P48379 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rfx2P48379 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx2P48379 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rfx2P48379 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rfx2P48379 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms