Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.68■□□□□ 0.42
Chd1P40201 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd1P40201 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.67■□□□□ 0.42
Chd1P40201 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chd1P40201 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Gm11540-201ENSMUST00000117457 780 ntBASIC17.67■□□□□ 0.42
Chd1P40201 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC17.67■□□□□ 0.42
Chd1P40201 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC17.67■□□□□ 0.42
Chd1P40201 AC122024.3-201ENSMUST00000217719 294 ntBASIC17.67■□□□□ 0.42
Chd1P40201 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC17.67■□□□□ 0.42
Chd1P40201 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chd1P40201 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC17.67■□□□□ 0.42
Chd1P40201 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chd1P40201 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC17.67■□□□□ 0.42
Chd1P40201 Gm12745-201ENSMUST00000121767 214 ntBASIC17.67■□□□□ 0.42
Chd1P40201 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Chd1P40201 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC17.67■□□□□ 0.42
Chd1P40201 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 AC158986.2-201ENSMUST00000227487 618 ntBASIC17.67■□□□□ 0.42
Chd1P40201 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd1P40201 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chd1P40201 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC17.66■□□□□ 0.42
Chd1P40201 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chd1P40201 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Chd1P40201 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chd1P40201 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chd1P40201 Gm37651-201ENSMUST00000194679 1494 ntBASIC17.66■□□□□ 0.42
Chd1P40201 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC17.66■□□□□ 0.42
Chd1P40201 Gm29543-201ENSMUST00000188138 967 ntBASIC17.66■□□□□ 0.42
Chd1P40201 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 AC154407.1-201ENSMUST00000226777 526 ntBASIC17.66■□□□□ 0.42
Chd1P40201 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd1P40201 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chd1P40201 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chd1P40201 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd1P40201 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Chd1P40201 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.65■□□□□ 0.42
Chd1P40201 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Gm4943-201ENSMUST00000132879 424 ntBASIC17.65■□□□□ 0.42
Chd1P40201 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC17.65■□□□□ 0.42
Chd1P40201 Gm42732-201ENSMUST00000202887 1197 ntBASIC17.65■□□□□ 0.42
Chd1P40201 Gm45090-201ENSMUST00000208775 1148 ntBASIC17.65■□□□□ 0.42
Chd1P40201 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chd1P40201 Nsmce2-203ENSMUST00000227173 1122 ntBASIC17.65■□□□□ 0.42
Chd1P40201 AC103672.1-201ENSMUST00000227502 365 ntBASIC17.65■□□□□ 0.42
Chd1P40201 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd1P40201 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd1P40201 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms