Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Nedd8P29595 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Nedd8P29595 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.08□□□□□ -0.64
Nedd8P29595 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Gm17837-201ENSMUST00000186435 985 ntBASIC11.08□□□□□ -0.64
Nedd8P29595 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nedd8P29595 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nedd8P29595 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nedd8P29595 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nedd8P29595 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nedd8P29595 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.08□□□□□ -0.64
Nedd8P29595 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm11439-201ENSMUST00000118598 409 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.07□□□□□ -0.64
Nedd8P29595 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm21854-201ENSMUST00000179901 471 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm27525-201ENSMUST00000184465 107 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Gm27741-201ENSMUST00000185060 237 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.07□□□□□ -0.64
Nedd8P29595 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.07□□□□□ -0.64
Nedd8P29595 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Nedd8P29595 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Nedd8P29595 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.07□□□□□ -0.64
Nedd8P29595 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.07□□□□□ -0.64
Nedd8P29595 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.07□□□□□ -0.64
Nedd8P29595 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nedd8P29595 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms