Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm11930-201ENSMUST00000117788 190 ntBASIC11.19□□□□□ -0.62
Cd40lgP27548 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.19□□□□□ -0.62
Cd40lgP27548 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.19□□□□□ -0.62
Cd40lgP27548 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.19□□□□□ -0.62
Cd40lgP27548 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.19□□□□□ -0.62
Cd40lgP27548 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm12314-201ENSMUST00000118104 538 ntBASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm11597-201ENSMUST00000121423 964 ntBASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.18□□□□□ -0.62
Cd40lgP27548 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.18□□□□□ -0.62
Cd40lgP27548 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cd40lgP27548 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cd40lgP27548 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm23270-201ENSMUST00000104055 131 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm24231-201ENSMUST00000104315 133 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Mir877-201ENSMUST00000104738 85 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm15276-201ENSMUST00000145953 498 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms