Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Gm44038-201ENSMUST00000203952 889 ntBASIC11.67□□□□□ -0.54
Msx1P13297 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm44760-201ENSMUST00000206375 1173 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.67□□□□□ -0.54
Msx1P13297 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.67□□□□□ -0.54
Msx1P13297 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Msx1P13297 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.67□□□□□ -0.54
Msx1P13297 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Msx1P13297 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Msx1P13297 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Msx1P13297 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Msx1P13297 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Msx1P13297 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.66□□□□□ -0.54
Msx1P13297 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.66□□□□□ -0.54
Msx1P13297 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gm27438-201ENSMUST00000183480 110 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Msx1P13297 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gm37024-201ENSMUST00000192224 868 ntBASIC11.66□□□□□ -0.54
Msx1P13297 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.66□□□□□ -0.54
Msx1P13297 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Msx1P13297 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Msx1P13297 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Msx1P13297 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Daam2-202ENSMUST00000224595 1926 ntBASIC11.66□□□□□ -0.54
Msx1P13297 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Msx1P13297 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Msx1P13297 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Msx1P13297 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Msx1P13297 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Msx1P13297 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msx1P13297 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Msx1P13297 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Msx1P13297 Gm14938-201ENSMUST00000119482 943 ntBASIC11.65□□□□□ -0.54
Msx1P13297 Gm11510-201ENSMUST00000120278 347 ntBASIC11.65□□□□□ -0.54
Msx1P13297 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms