Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm17931-201ENSMUST00000208132 634 ntBASIC10.52□□□□□ -0.73
PtcraP0C6B2 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.52□□□□□ -0.73
PtcraP0C6B2 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.52□□□□□ -0.73
PtcraP0C6B2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Gzmn-202ENSMUST00000225535 989 ntBASIC10.52□□□□□ -0.73
PtcraP0C6B2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.52□□□□□ -0.73
PtcraP0C6B2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.52□□□□□ -0.73
PtcraP0C6B2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
PtcraP0C6B2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.51□□□□□ -0.73
PtcraP0C6B2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.51□□□□□ -0.73
PtcraP0C6B2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm13296-201ENSMUST00000117854 997 ntBASIC10.51□□□□□ -0.73
PtcraP0C6B2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.51□□□□□ -0.73
PtcraP0C6B2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.51□□□□□ -0.73
PtcraP0C6B2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
PtcraP0C6B2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.5□□□□□ -0.73
PtcraP0C6B2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PtcraP0C6B2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
PtcraP0C6B2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
PtcraP0C6B2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PtcraP0C6B2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
PtcraP0C6B2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
PtcraP0C6B2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
PtcraP0C6B2 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms