Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cops4O88544 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.12□□□□□ -0.63
Cops4O88544 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.12□□□□□ -0.63
Cops4O88544 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm24644-201ENSMUST00000157114 139 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.12□□□□□ -0.63
Cops4O88544 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.12□□□□□ -0.63
Cops4O88544 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.12□□□□□ -0.63
Cops4O88544 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm29705-201ENSMUST00000212598 474 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm10012-201ENSMUST00000078252 192 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 BC043934-202ENSMUST00000185694 2356 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cops4O88544 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.12□□□□□ -0.63
Cops4O88544 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cops4O88544 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cops4O88544 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Gm11478-201ENSMUST00000117851 599 ntBASIC11.11□□□□□ -0.63
Cops4O88544 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.11□□□□□ -0.63
Cops4O88544 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Gm27847-201ENSMUST00000183711 107 ntBASIC11.11□□□□□ -0.63
Cops4O88544 Gm27375-201ENSMUST00000183799 107 ntBASIC11.11□□□□□ -0.63
Cops4O88544 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cops4O88544 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.11□□□□□ -0.63
Cops4O88544 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cops4O88544 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Cops4O88544 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cops4O88544 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cops4O88544 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cops4O88544 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms