Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ebf3O08791 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.57□□□□□ -0.4
Ebf3O08791 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ebf3O08791 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf3O08791 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.56□□□□□ -0.4
Ebf3O08791 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ebf3O08791 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 Gm12165-201ENSMUST00000117047 342 ntBASIC12.56□□□□□ -0.4
Ebf3O08791 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.56□□□□□ -0.4
Ebf3O08791 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.56□□□□□ -0.4
Ebf3O08791 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.56□□□□□ -0.4
Ebf3O08791 Gm5051-201ENSMUST00000204085 485 ntBASIC12.56□□□□□ -0.4
Ebf3O08791 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.56□□□□□ -0.4
Ebf3O08791 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.56□□□□□ -0.4
Ebf3O08791 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.56□□□□□ -0.4
Ebf3O08791 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf3O08791 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.56□□□□□ -0.4
Ebf3O08791 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf3O08791 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Gm13045-201ENSMUST00000119019 712 ntBASIC12.55□□□□□ -0.4
Ebf3O08791 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.55□□□□□ -0.4
Ebf3O08791 Gm10051-201ENSMUST00000145209 414 ntBASIC12.55□□□□□ -0.4
Ebf3O08791 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.55□□□□□ -0.4
Ebf3O08791 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.55□□□□□ -0.4
Ebf3O08791 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.55□□□□□ -0.4
Ebf3O08791 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.55□□□□□ -0.4
Ebf3O08791 Gm44126-201ENSMUST00000204831 514 ntBASIC12.55□□□□□ -0.4
Ebf3O08791 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ebf3O08791 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ebf3O08791 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ebf3O08791 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf3O08791 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms