Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm22711-201ENSMUST00000116890 133 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm12943-201ENSMUST00000119616 210 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm15744-201ENSMUST00000161734 213 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm18460-201ENSMUST00000208088 464 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm5805-201ENSMUST00000072779 456 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.54□□□□□ -0.08
NpcdF8VQB8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NpcdF8VQB8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NpcdF8VQB8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.53□□□□□ -0.08
NpcdF8VQB8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.53□□□□□ -0.08
NpcdF8VQB8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm8731-201ENSMUST00000118088 412 ntBASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm11979-201ENSMUST00000119629 743 ntBASIC14.53□□□□□ -0.08
NpcdF8VQB8 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm26134-201ENSMUST00000178484 110 ntBASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm9022-201ENSMUST00000182482 992 ntBASIC14.53□□□□□ -0.08
NpcdF8VQB8 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NpcdF8VQB8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.52□□□□□ -0.08
NpcdF8VQB8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.52□□□□□ -0.08
NpcdF8VQB8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms