Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm12857-201ENSMUST00000117678 592 ntBASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm11450-201ENSMUST00000121144 333 ntBASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm9136-201ENSMUST00000193368 454 ntBASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm44100-201ENSMUST00000204329 436 ntBASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Gm7848-201ENSMUST00000210739 718 ntBASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tmf1B9EKI3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm13035-201ENSMUST00000117496 342 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm14724-201ENSMUST00000118400 537 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm8566-201ENSMUST00000120174 465 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm9550-201ENSMUST00000161130 862 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm20426-201ENSMUST00000173657 440 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tmf1B9EKI3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm4993-201ENSMUST00000118719 1174 ntBASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm12501-201ENSMUST00000119163 529 ntBASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm5369-201ENSMUST00000217499 588 ntBASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tmf1B9EKI3 Gm18983-201ENSMUST00000222884 2729 ntBASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.27■□□□□ 0.2
Tmf1B9EKI3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms