Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Scn3aA2ASI5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn3aA2ASI5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn3aA2ASI5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm15615-201ENSMUST00000118876 198 ntBASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm37299-201ENSMUST00000193951 826 ntBASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm8459-201ENSMUST00000162504 760 ntBASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm44158-201ENSMUST00000203881 505 ntBASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn3aA2ASI5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm11451-201ENSMUST00000118946 630 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm15744-201ENSMUST00000161734 213 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm42599-201ENSMUST00000201308 469 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm44506-201ENSMUST00000206278 965 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn3aA2ASI5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm23272-201ENSMUST00000104053 129 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Mir8093-201ENSMUST00000185043 137 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm34023-201ENSMUST00000195539 217 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn3aA2ASI5 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.31□□□□□ -0.28
Scn3aA2ASI5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms