Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gm24830-201ENSMUST00000102024 166 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gm6222-202ENSMUST00000182143 629 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gm27731-201ENSMUST00000185192 107 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Snora73a-201ENSMUST00000082453 205 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gm26232-201ENSMUST00000083360 166 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm23912-201ENSMUST00000104687 87 ntBASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm12058-201ENSMUST00000118614 437 ntBASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm37201-201ENSMUST00000191845 523 ntBASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm6266-201ENSMUST00000203844 806 ntBASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.88□□□□□ -0.67
H2afb3S4R1G7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H2afb3S4R1G7 Gm15824-201ENSMUST00000119516 955 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms