Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.52□□□□□ -0.24
AmfrQ9R049 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Gm14832-201ENSMUST00000121289 322 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm26083-201ENSMUST00000157904 193 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm24845-201ENSMUST00000158034 109 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm27023-201ENSMUST00000182372 285 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm13097-201ENSMUST00000210722 397 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm10076-201ENSMUST00000073238 384 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
AmfrQ9R049 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AmfrQ9R049 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AmfrQ9R049 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.52□□□□□ -0.25
AmfrQ9R049 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.52□□□□□ -0.25
AmfrQ9R049 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
AmfrQ9R049 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm9083-201ENSMUST00000120423 819 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm15547-201ENSMUST00000122152 333 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm4034-201ENSMUST00000187674 480 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm38317-201ENSMUST00000195564 343 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Rubie-203ENSMUST00000227803 2430 ntBASIC13.51□□□□□ -0.25
AmfrQ9R049 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.51□□□□□ -0.25
AmfrQ9R049 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AmfrQ9R049 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.5□□□□□ -0.25
AmfrQ9R049 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.5□□□□□ -0.25
AmfrQ9R049 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Gm28882-201ENSMUST00000185504 314 ntBASIC13.5□□□□□ -0.25
AmfrQ9R049 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 AA914427-201ENSMUST00000193194 1166 ntBASIC13.5□□□□□ -0.25
AmfrQ9R049 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.5□□□□□ -0.25
AmfrQ9R049 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Gm6082-201ENSMUST00000215204 454 ntBASIC13.5□□□□□ -0.25
AmfrQ9R049 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.5□□□□□ -0.25
AmfrQ9R049 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AmfrQ9R049 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms