Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf4Q9QZS2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm11637-201ENSMUST00000120601 592 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm7653-201ENSMUST00000214567 508 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.18□□□□□ -0.46
Rnf4Q9QZS2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm15429-201ENSMUST00000151268 798 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm26185-201ENSMUST00000157692 266 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm24694-201ENSMUST00000180054 110 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm27663-201ENSMUST00000184839 110 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm18187-201ENSMUST00000196476 984 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf4Q9QZS2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms