Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Nsd1-205ENSMUST00000224693 852 ntBASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ube3bQ9ES34 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm11663-201ENSMUST00000117888 290 ntBASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ube3bQ9ES34 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm23251-201ENSMUST00000103773 110 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm24891-201ENSMUST00000104391 136 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm8199-201ENSMUST00000121323 823 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm23699-201ENSMUST00000158835 135 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm43378-201ENSMUST00000199336 582 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm2553-201ENSMUST00000215986 605 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Spcs1-203ENSMUST00000226374 592 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gm10288-201ENSMUST00000084614 537 ntBASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ube3bQ9ES34 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3bQ9ES34 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3bQ9ES34 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ube3bQ9ES34 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms