Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm24830-201ENSMUST00000102024 166 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm26232-201ENSMUST00000083360 166 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm37917-201ENSMUST00000194711 392 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ddx47Q9CWX9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms