Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm16305-201ENSMUST00000140747 556 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm43966-201ENSMUST00000203301 612 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm10580-201ENSMUST00000097985 396 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm10582-201ENSMUST00000097987 396 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm10583-201ENSMUST00000097988 396 ntBASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh15Q99PJ1 Gm43167-201ENSMUST00000202001 1606 ntBASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gm13286-201ENSMUST00000117750 537 ntBASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gm37284-201ENSMUST00000193607 539 ntBASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Id2-203ENSMUST00000222667 958 ntBASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.32□□□□□ -0.28
Pcdh15Q99PJ1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm15707-201ENSMUST00000118804 996 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm29304-201ENSMUST00000186555 695 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm29223-201ENSMUST00000188867 695 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm37921-201ENSMUST00000194333 695 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.31□□□□□ -0.28
Pcdh15Q99PJ1 Gm15329-201ENSMUST00000121408 155 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms