Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Cts7-204ENSMUST00000225321 1257 ntBASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gm26035-201ENSMUST00000083065 308 ntBASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vmp1Q99KU0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gm2991-201ENSMUST00000173338 480 ntBASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gm6334-201ENSMUST00000207083 228 ntBASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vmp1Q99KU0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.69□□□□□ -0.54
Vmp1Q99KU0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms