Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm17655-201ENSMUST00000167969 255 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm31306-201ENSMUST00000197517 508 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm44138-201ENSMUST00000204939 271 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm45331-201ENSMUST00000209868 554 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm23448-201ENSMUST00000083151 104 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm23058-201ENSMUST00000093703 107 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Mir1247-201ENSMUST00000116706 82 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm6023-201ENSMUST00000118217 606 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm12706-201ENSMUST00000121588 698 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm25179-201ENSMUST00000122632 128 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm15274-201ENSMUST00000131442 291 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm21979-201ENSMUST00000139887 291 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm15259-201ENSMUST00000151262 291 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm5511-201ENSMUST00000189380 802 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm42720-201ENSMUST00000196813 300 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm45889-201ENSMUST00000209535 1057 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC104906.1-201ENSMUST00000218122 913 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm9823-201ENSMUST00000051212 327 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb20Q91XZ9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms