Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm42627-201ENSMUST00000197347 224 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Rgr-203ENSMUST00000225070 4704 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gm38002-201ENSMUST00000193255 180 ntBASIC12.09□□□□□ -0.47
Vps39Q8R5L3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps39Q8R5L3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Vps39Q8R5L3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Vps39Q8R5L3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Vps39Q8R5L3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vps39Q8R5L3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps39Q8R5L3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms