Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup35Q8R4R6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Gm5904-201ENSMUST00000210286 865 ntBASIC9.82□□□□□ -0.84
Nup35Q8R4R6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Gm10076-201ENSMUST00000073238 384 ntBASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup35Q8R4R6 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Rgr-203ENSMUST00000225070 4704 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Gm8420-201ENSMUST00000097103 598 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 BC043934-202ENSMUST00000185694 2356 ntBASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Nup35Q8R4R6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms