Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afjQ8R1M2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afjQ8R1M2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
H2afjQ8R1M2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
H2afjQ8R1M2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
H2afjQ8R1M2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Gm8018-201ENSMUST00000173536 789 ntBASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
H2afjQ8R1M2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm11591-201ENSMUST00000120063 702 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm11964-201ENSMUST00000120982 444 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm5781-201ENSMUST00000219792 443 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
H2afjQ8R1M2 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Gm24136-201ENSMUST00000083374 165 ntBASIC11.21□□□□□ -0.61
H2afjQ8R1M2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afjQ8R1M2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
H2afjQ8R1M2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afjQ8R1M2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afjQ8R1M2 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.21□□□□□ -0.62
H2afjQ8R1M2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afjQ8R1M2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H2afjQ8R1M2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afjQ8R1M2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms