Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gm11793-201ENSMUST00000120433 981 ntBASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gm38241-201ENSMUST00000192641 898 ntBASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cchcr1Q8K2I2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cchcr1Q8K2I2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm11531-201ENSMUST00000117614 555 ntBASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm15610-201ENSMUST00000120584 195 ntBASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm13786-201ENSMUST00000122371 333 ntBASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm37424-201ENSMUST00000191727 561 ntBASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm19994-201ENSMUST00000217086 586 ntBASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cchcr1Q8K2I2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm4986-201ENSMUST00000119731 549 ntBASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm43118-201ENSMUST00000199149 775 ntBASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cchcr1Q8K2I2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms