Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SprnQ8BWU1 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm13492-201ENSMUST00000119772 665 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm18054-201ENSMUST00000207539 555 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm7399-201ENSMUST00000032395 858 ntBASIC10.65□□□□□ -0.7
SprnQ8BWU1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.65□□□□□ -0.7
SprnQ8BWU1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.65□□□□□ -0.71
SprnQ8BWU1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
SprnQ8BWU1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.64□□□□□ -0.71
SprnQ8BWU1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.64□□□□□ -0.71
SprnQ8BWU1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.64□□□□□ -0.71
SprnQ8BWU1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SprnQ8BWU1 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.64□□□□□ -0.71
SprnQ8BWU1 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.64□□□□□ -0.71
SprnQ8BWU1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms