Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Mir1901-201ENSMUST00000122616 78 ntBASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Gm25545-201ENSMUST00000122673 323 ntBASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Gm20392-201ENSMUST00000173047 701 ntBASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Gm25517-201ENSMUST00000083865 134 ntBASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Prpf38bQ80SY5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm10051-201ENSMUST00000145209 414 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm15881-201ENSMUST00000148792 942 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm22121-201ENSMUST00000175148 54 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm25072-201ENSMUST00000175233 235 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm29615-201ENSMUST00000185371 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28224-201ENSMUST00000186078 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm29001-201ENSMUST00000186177 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28292-201ENSMUST00000186593 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28101-201ENSMUST00000187608 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm29076-201ENSMUST00000187689 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28302-201ENSMUST00000187931 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28646-201ENSMUST00000188220 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28205-201ENSMUST00000189177 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm29032-201ENSMUST00000189797 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm28695-201ENSMUST00000190300 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm37448-201ENSMUST00000192795 697 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm37319-201ENSMUST00000193500 636 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm43452-201ENSMUST00000201873 991 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm19287-201ENSMUST00000203190 358 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm10076-201ENSMUST00000073238 384 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf38bQ80SY5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Prpf38bQ80SY5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 362.1 ms