Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm27682-201ENSMUST00000183930 110 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm6745-201ENSMUST00000199216 526 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm7561-201ENSMUST00000211203 886 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm6091-201ENSMUST00000098307 165 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm24934-201ENSMUST00000103764 111 ntBASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.89□□□□□ -0.51
Scaf4Q6PFF0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Gm42693-201ENSMUST00000196779 631 ntBASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.88□□□□□ -0.51
Scaf4Q6PFF0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms