Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Map1b-203ENSMUST00000223725 2669 ntBASIC11.8□□□□□ -0.52
Vsx2Q61412 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.79□□□□□ -0.52
Vsx2Q61412 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.79□□□□□ -0.52
Vsx2Q61412 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm24845-201ENSMUST00000158034 109 ntBASIC11.79□□□□□ -0.52
Vsx2Q61412 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vsx2Q61412 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.79□□□□□ -0.52
Vsx2Q61412 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Vsx2Q61412 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vsx2Q61412 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vsx2Q61412 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm14760-201ENSMUST00000121831 999 ntBASIC11.78□□□□□ -0.52
Vsx2Q61412 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm38241-201ENSMUST00000192641 898 ntBASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Gm10312-201ENSMUST00000078515 489 ntBASIC11.78□□□□□ -0.52
Vsx2Q61412 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vsx2Q61412 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vsx2Q61412 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vsx2Q61412 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vsx2Q61412 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.77□□□□□ -0.52
Vsx2Q61412 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Vsx2Q61412 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vsx2Q61412 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms