Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.54□□□□□ -0.56
Nr1h4Q60641 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm24830-201ENSMUST00000102024 166 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm44405-201ENSMUST00000198952 126 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm5035-201ENSMUST00000215581 927 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm26232-201ENSMUST00000083360 166 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm22058-201ENSMUST00000083393 310 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm10268-201ENSMUST00000085340 555 ntBASIC11.53□□□□□ -0.56
Nr1h4Q60641 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.53□□□□□ -0.56
Nr1h4Q60641 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Nr1h4Q60641 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nr1h4Q60641 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.52□□□□□ -0.57
Nr1h4Q60641 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.52□□□□□ -0.57
Nr1h4Q60641 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Gm29649-201ENSMUST00000185649 419 ntBASIC11.52□□□□□ -0.57
Nr1h4Q60641 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Gm18584-201ENSMUST00000203098 964 ntBASIC11.52□□□□□ -0.57
Nr1h4Q60641 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms