Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc88aQ5SNZ0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm13182-201ENSMUST00000122241 312 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm2965-201ENSMUST00000198365 343 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm3150-201ENSMUST00000166418 204 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm9192-201ENSMUST00000183221 985 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm40879-201ENSMUST00000220759 612 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Gm26448-201ENSMUST00000082446 203 ntBASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc88aQ5SNZ0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc88aQ5SNZ0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc88aQ5SNZ0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm11836-201ENSMUST00000121022 441 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm38117-201ENSMUST00000194653 939 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccdc88aQ5SNZ0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms