Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm7287-201ENSMUST00000205267 602 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm15823-201ENSMUST00000064305 670 ntBASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm24830-201ENSMUST00000102024 166 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm13315-201ENSMUST00000120376 991 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm44855-201ENSMUST00000205725 362 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm10146-201ENSMUST00000072739 309 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gm26232-201ENSMUST00000083360 166 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav15-1-dv6-1Q5R1D2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms