Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 AY036118-201ENSMUST00000200021 923 ntBASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm8956-201ENSMUST00000203939 825 ntBASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nhlrc4Q3UP44 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm12380-201ENSMUST00000119012 544 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm15004-201ENSMUST00000119192 630 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm14441-201ENSMUST00000121960 540 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm29615-201ENSMUST00000185371 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28224-201ENSMUST00000186078 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm29001-201ENSMUST00000186177 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28292-201ENSMUST00000186593 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28101-201ENSMUST00000187608 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm29076-201ENSMUST00000187689 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28302-201ENSMUST00000187931 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28646-201ENSMUST00000188220 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28205-201ENSMUST00000189177 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm29032-201ENSMUST00000189797 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm28695-201ENSMUST00000190300 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm37448-201ENSMUST00000192795 697 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nhlrc4Q3UP44 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Nhlrc4Q3UP44 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms