Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm10478-201ENSMUST00000084451 396 ntBASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43aQ3TL54 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm27514-201ENSMUST00000183692 110 ntBASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm9136-201ENSMUST00000193368 454 ntBASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm44405-201ENSMUST00000198952 126 ntBASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm45925-201ENSMUST00000218882 744 ntBASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim43aQ3TL54 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm10076-201ENSMUST00000073238 384 ntBASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms