Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SobpQ0P5V2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SobpQ0P5V2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC13.71□□□□□ -0.22
SobpQ0P5V2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm12345-201ENSMUST00000119288 898 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm8226-201ENSMUST00000190511 798 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm6518-201ENSMUST00000208450 342 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm4978-201ENSMUST00000071565 801 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.7□□□□□ -0.22
SobpQ0P5V2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SobpQ0P5V2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.69□□□□□ -0.22
SobpQ0P5V2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Mir453-201ENSMUST00000104732 82 ntBASIC13.69□□□□□ -0.22
SobpQ0P5V2 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Kif4-ps-202ENSMUST00000185083 652 ntBASIC13.69□□□□□ -0.22
SobpQ0P5V2 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.69□□□□□ -0.22
SobpQ0P5V2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SobpQ0P5V2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SobpQ0P5V2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SobpQ0P5V2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SobpQ0P5V2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms