Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.47□□□□□ -0.57
Cxcr5Q04683 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.47□□□□□ -0.57
Cxcr5Q04683 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.47□□□□□ -0.57
Cxcr5Q04683 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm9136-201ENSMUST00000193368 454 ntBASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.47□□□□□ -0.57
Cxcr5Q04683 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.47□□□□□ -0.57
Cxcr5Q04683 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cxcr5Q04683 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.46□□□□□ -0.57
Cxcr5Q04683 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm7653-201ENSMUST00000214567 508 ntBASIC11.46□□□□□ -0.57
Cxcr5Q04683 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.46□□□□□ -0.57
Cxcr5Q04683 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.46□□□□□ -0.57
Cxcr5Q04683 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cxcr5Q04683 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cxcr5Q04683 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms