Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm13786-201ENSMUST00000122371 333 ntBASIC12.16□□□□□ -0.46
Pfdn6Q03958 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm18711-201ENSMUST00000199341 750 ntBASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm10608-202ENSMUST00000213924 676 ntBASIC12.16□□□□□ -0.46
Pfdn6Q03958 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm10478-201ENSMUST00000084451 396 ntBASIC12.16□□□□□ -0.46
Pfdn6Q03958 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfdn6Q03958 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.15□□□□□ -0.46
Pfdn6Q03958 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.15□□□□□ -0.46
Pfdn6Q03958 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn6Q03958 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.15□□□□□ -0.46
Pfdn6Q03958 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn6Q03958 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.47
Pfdn6Q03958 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Pfdn6Q03958 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Pfdn6Q03958 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfdn6Q03958 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfdn6Q03958 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pfdn6Q03958 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm11222-201ENSMUST00000119005 738 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm13297-201ENSMUST00000120205 934 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm38158-201ENSMUST00000194617 339 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm42937-201ENSMUST00000197360 752 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm43118-201ENSMUST00000199149 775 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Gm18935-201ENSMUST00000212692 664 ntBASIC12.14□□□□□ -0.47
Pfdn6Q03958 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn6Q03958 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms