Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.34□□□□□ -0.75
Smn1P97801 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Smn1P97801 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Smn1P97801 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.33□□□□□ -0.76
Smn1P97801 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smn1P97801 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.33□□□□□ -0.76
Smn1P97801 Gm24644-201ENSMUST00000157114 139 ntBASIC10.33□□□□□ -0.76
Smn1P97801 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Gm44405-201ENSMUST00000198952 126 ntBASIC10.33□□□□□ -0.76
Smn1P97801 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Smn1P97801 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.33□□□□□ -0.76
Smn1P97801 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Gm5904-201ENSMUST00000210286 865 ntBASIC10.33□□□□□ -0.76
Smn1P97801 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smn1P97801 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smn1P97801 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.33□□□□□ -0.76
Smn1P97801 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smn1P97801 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
Smn1P97801 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Smn1P97801 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Gm24830-201ENSMUST00000102024 166 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Gm12314-201ENSMUST00000118104 538 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Gm11814-201ENSMUST00000119515 929 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.32□□□□□ -0.76
Smn1P97801 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Gm27892-201ENSMUST00000185017 106 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Gm17794-201ENSMUST00000220252 955 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smn1P97801 Gm26232-201ENSMUST00000083360 166 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.32□□□□□ -0.76
Smn1P97801 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms