Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcbP82349 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SgcbP82349 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Gm2383-201ENSMUST00000181461 807 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.82□□□□□ -0.68
SgcbP82349 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.82□□□□□ -0.68
SgcbP82349 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.82□□□□□ -0.68
SgcbP82349 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Gm18711-201ENSMUST00000199341 750 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Gm18212-201ENSMUST00000211678 889 ntBASIC10.82□□□□□ -0.68
SgcbP82349 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.82□□□□□ -0.68
SgcbP82349 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
SgcbP82349 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcbP82349 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SgcbP82349 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcbP82349 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcbP82349 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Rprl1-201ENSMUST00000158050 327 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm18056-201ENSMUST00000207670 568 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Gm18061-201ENSMUST00000208350 562 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Gm18063-201ENSMUST00000208529 568 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Gm18052-201ENSMUST00000208750 559 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.81□□□□□ -0.68
SgcbP82349 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcbP82349 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.81□□□□□ -0.68
SgcbP82349 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SgcbP82349 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.81□□□□□ -0.68
SgcbP82349 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms