Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Mir1247-201ENSMUST00000116706 82 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm6023-201ENSMUST00000118217 606 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm3890-201ENSMUST00000182416 207 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm42599-201ENSMUST00000201308 469 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm32025-201ENSMUST00000217960 307 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Gm26035-201ENSMUST00000083065 308 ntBASIC10.67□□□□□ -0.7
Sec61a1P61620 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a1P61620 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a1P61620 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.66□□□□□ -0.7
Sec61a1P61620 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm14704-201ENSMUST00000120300 874 ntBASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.66□□□□□ -0.7
Sec61a1P61620 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a1P61620 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a1P61620 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a1P61620 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms