Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Tubgcp3P58854 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubgcp3P58854 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubgcp3P58854 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubgcp3P58854 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.34□□□□□ -0.43
Tubgcp3P58854 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.34□□□□□ -0.43
Tubgcp3P58854 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Gm30285-201ENSMUST00000214614 422 ntBASIC12.34□□□□□ -0.43
Tubgcp3P58854 Gm9996-201ENSMUST00000070359 913 ntBASIC12.34□□□□□ -0.43
Tubgcp3P58854 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.34□□□□□ -0.43
Tubgcp3P58854 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubgcp3P58854 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.33□□□□□ -0.44
Tubgcp3P58854 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.33□□□□□ -0.44
Tubgcp3P58854 Rprl1-201ENSMUST00000158050 327 ntBASIC12.33□□□□□ -0.44
Tubgcp3P58854 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm18711-201ENSMUST00000199341 750 ntBASIC12.33□□□□□ -0.44
Tubgcp3P58854 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm7399-201ENSMUST00000032395 858 ntBASIC12.33□□□□□ -0.44
Tubgcp3P58854 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tubgcp3P58854 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubgcp3P58854 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.32□□□□□ -0.44
Tubgcp3P58854 Gm12241-201ENSMUST00000118330 726 ntBASIC12.32□□□□□ -0.44
Tubgcp3P58854 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms