Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.62□□□□□ -0.23
Rrp1P56183 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
Rrp1P56183 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.62□□□□□ -0.23
Rrp1P56183 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rrp1P56183 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Rrp1P56183 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.61□□□□□ -0.23
Rrp1P56183 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Gm14660-201ENSMUST00000119809 575 ntBASIC13.61□□□□□ -0.23
Rrp1P56183 Gm13875-201ENSMUST00000120162 282 ntBASIC13.61□□□□□ -0.23
Rrp1P56183 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.61□□□□□ -0.23
Rrp1P56183 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.61□□□□□ -0.23
Rrp1P56183 Gm16379-201ENSMUST00000161469 348 ntBASIC13.61□□□□□ -0.23
Rrp1P56183 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Gm8762-201ENSMUST00000193486 339 ntBASIC13.61□□□□□ -0.23
Rrp1P56183 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.61□□□□□ -0.23
Rrp1P56183 Gm17931-201ENSMUST00000208132 634 ntBASIC13.61□□□□□ -0.23
Rrp1P56183 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rrp1P56183 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.61□□□□□ -0.23
Rrp1P56183 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Rrp1P56183 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rrp1P56183 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Rrp1P56183 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Gm12957-201ENSMUST00000117835 377 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rrp1P56183 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.6□□□□□ -0.23
Rrp1P56183 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Gm5706-201ENSMUST00000181525 993 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.6□□□□□ -0.23
Rrp1P56183 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rrp1P56183 Snora73a-201ENSMUST00000082453 205 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.6□□□□□ -0.23
Rrp1P56183 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rrp1P56183 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Rrp1P56183 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rrp1P56183 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rrp1P56183 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.59□□□□□ -0.23
Rrp1P56183 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms