Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdh11P55288 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Cdh11P55288 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.03□□□□□ -0.64
Cdh11P55288 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm12502-201ENSMUST00000120197 444 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Gm14381-201ENSMUST00000122105 414 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm24548-201ENSMUST00000158650 108 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm45865-201ENSMUST00000211815 945 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Gm32025-201ENSMUST00000217960 307 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cdh11P55288 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cdh11P55288 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.03□□□□□ -0.64
Cdh11P55288 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdh11P55288 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.03□□□□□ -0.64
Cdh11P55288 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdh11P55288 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Cdh11P55288 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Cdh11P55288 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cdh11P55288 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cdh11P55288 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Cdh11P55288 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.02□□□□□ -0.64
Cdh11P55288 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdh11P55288 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm10434-201ENSMUST00000101158 471 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.02□□□□□ -0.65
Cdh11P55288 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm13297-201ENSMUST00000120205 934 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.02□□□□□ -0.65
Cdh11P55288 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdh11P55288 Gm22121-201ENSMUST00000175148 54 ntBASIC11.02□□□□□ -0.65
Cdh11P55288 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdh11P55288 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms