Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm22442-201ENSMUST00000157256 144 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Gm4654-201ENSMUST00000183305 982 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm29499-201ENSMUST00000189151 486 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm28329-201ENSMUST00000191208 689 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm29171-201ENSMUST00000191397 486 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm42657-201ENSMUST00000201746 211 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm19091-201ENSMUST00000208120 978 ntBASIC15.24■□□□□ 0.03
Msh6P54276 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh6P54276 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.24■□□□□ 0.03
Msh6P54276 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh6P54276 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.23■□□□□ 0.03
Msh6P54276 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Msh6P54276 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Msh6P54276 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.23■□□□□ 0.03
Msh6P54276 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.23■□□□□ 0.03
Msh6P54276 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Msh6P54276 Gm13182-201ENSMUST00000122241 312 ntBASIC15.23■□□□□ 0.03
Msh6P54276 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.23■□□□□ 0.03
Msh6P54276 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.23■□□□□ 0.03
Msh6P54276 Gm42599-201ENSMUST00000201308 469 ntBASIC15.23■□□□□ 0.03
Msh6P54276 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.23■□□□□ 0.03
Msh6P54276 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Msh6P54276 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.23■□□□□ 0.03
Msh6P54276 AC165260.2-203ENSMUST00000224237 336 ntBASIC15.23■□□□□ 0.03
Msh6P54276 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh6P54276 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Msh6P54276 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Msh6P54276 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Msh6P54276 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Gm12036-201ENSMUST00000120008 530 ntBASIC15.22■□□□□ 0.03
Msh6P54276 Gm15610-201ENSMUST00000120584 195 ntBASIC15.22■□□□□ 0.03
Msh6P54276 Gm11836-201ENSMUST00000121022 441 ntBASIC15.22■□□□□ 0.03
Msh6P54276 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Msh6P54276 Gm38117-201ENSMUST00000194653 939 ntBASIC15.22■□□□□ 0.03
Msh6P54276 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.22■□□□□ 0.03
Msh6P54276 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Msh6P54276 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.22■□□□□ 0.03
Msh6P54276 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Msh6P54276 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Msh6P54276 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Msh6P54276 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.22■□□□□ 0.03
Msh6P54276 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Msh6P54276 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.21■□□□□ 0.03
Msh6P54276 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Msh6P54276 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Msh6P54276 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.21■□□□□ 0.03
Msh6P54276 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Msh6P54276 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Gm11660-201ENSMUST00000120955 412 ntBASIC15.21■□□□□ 0.02
Msh6P54276 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms