Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm45224-201ENSMUST00000208203 414 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.06□□□□□ -0.64
Nkx2-2P42586 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-2P42586 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm8956-201ENSMUST00000203939 825 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm6082-201ENSMUST00000215204 454 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkx2-2P42586 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkx2-2P42586 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms