Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rmrp-201ENSMUST00000157463 271 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.96□□□□□ -0.82
Timp3P39876 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.96□□□□□ -0.82
Timp3P39876 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.96□□□□□ -0.82
Timp3P39876 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Timp3P39876 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Timp3P39876 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Timp3P39876 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Gm14028-201ENSMUST00000117434 479 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Gm13996-201ENSMUST00000118456 430 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Mir5132-201ENSMUST00000175166 71 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Gm32999-201ENSMUST00000192693 562 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Timp3P39876 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Timp3P39876 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.95□□□□□ -0.82
Timp3P39876 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Timp3P39876 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Timp3P39876 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.94□□□□□ -0.82
Timp3P39876 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Timp3P39876 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.94□□□□□ -0.82
Timp3P39876 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Timp3P39876 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Timp3P39876 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms