Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm24255-201ENSMUST00000104481 128 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm11531-201ENSMUST00000117614 555 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm25043-201ENSMUST00000158604 212 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm5950-201ENSMUST00000213337 772 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm10312-201ENSMUST00000078515 489 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.21□□□□□ -0.62
Cd40lgP27548 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Cd40lgP27548 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.21□□□□□ -0.62
Cd40lgP27548 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cd40lgP27548 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cd40lgP27548 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.2□□□□□ -0.62
Cd40lgP27548 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cd40lgP27548 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm13875-201ENSMUST00000120162 282 ntBASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm13315-201ENSMUST00000120376 991 ntBASIC11.2□□□□□ -0.62
Cd40lgP27548 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm13570-201ENSMUST00000140763 309 ntBASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm26083-201ENSMUST00000157904 193 ntBASIC11.2□□□□□ -0.62
Cd40lgP27548 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cd40lgP27548 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cd40lgP27548 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.19□□□□□ -0.62
Cd40lgP27548 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cd40lgP27548 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.19□□□□□ -0.62
Cd40lgP27548 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms