Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PdgfrbP05622 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.26□□□□□ -0.45
PdgfrbP05622 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.26□□□□□ -0.45
PdgfrbP05622 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PdgfrbP05622 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.26□□□□□ -0.45
PdgfrbP05622 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PdgfrbP05622 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm11930-201ENSMUST00000117788 190 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm44364-201ENSMUST00000198368 141 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm40332-201ENSMUST00000199847 938 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.25□□□□□ -0.45
PdgfrbP05622 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PdgfrbP05622 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
PdgfrbP05622 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PdgfrbP05622 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms