Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.35□□□□□ -0.75
P04946 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.35□□□□□ -0.75
P04946 Gm8815-201ENSMUST00000173809 620 ntBASIC10.35□□□□□ -0.75
P04946 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.35□□□□□ -0.75
P04946 Gm37246-201ENSMUST00000192665 835 ntBASIC10.35□□□□□ -0.75
P04946 Gm9555-201ENSMUST00000200908 583 ntBASIC10.35□□□□□ -0.75
P04946 Gm3786-201ENSMUST00000202659 378 ntBASIC10.35□□□□□ -0.75
P04946 Gm43947-201ENSMUST00000203019 959 ntBASIC10.35□□□□□ -0.75
P04946 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.35□□□□□ -0.75
P04946 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.35□□□□□ -0.75
P04946 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.35□□□□□ -0.75
P04946 Thoc7-209ENSMUST00000225325 765 ntBASIC10.35□□□□□ -0.75
P04946 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Ntng1-201ENSMUST00000051253 327 ntBASIC10.35□□□□□ -0.75
P04946 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
P04946 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.35□□□□□ -0.75
P04946 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.35□□□□□ -0.75
P04946 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P04946 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04946 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04946 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
P04946 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Map1b-203ENSMUST00000223725 2669 ntBASIC10.34□□□□□ -0.75
P04946 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
P04946 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.34□□□□□ -0.75
P04946 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P04946 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
P04946 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
P04946 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P04946 Gm13809-201ENSMUST00000117921 597 ntBASIC10.34□□□□□ -0.75
P04946 Gm13408-201ENSMUST00000119822 798 ntBASIC10.34□□□□□ -0.75
P04946 Gm13935-201ENSMUST00000121859 798 ntBASIC10.34□□□□□ -0.75
P04946 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P04946 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
P04946 Gm4310-201ENSMUST00000177847 889 ntBASIC10.34□□□□□ -0.75
P04946 Gm9211-201ENSMUST00000182882 975 ntBASIC10.34□□□□□ -0.75
P04946 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.34□□□□□ -0.75
P04946 Gm45575-201ENSMUST00000210283 548 ntBASIC10.34□□□□□ -0.75
P04946 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.34□□□□□ -0.75
P04946 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.34□□□□□ -0.75
P04946 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.34□□□□□ -0.75
P04946 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.34□□□□□ -0.75
P04946 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P04946 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P04946 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
P04946 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Cog3-203ENSMUST00000227473 4197 ntBASIC10.34□□□□□ -0.75
P04946 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.34□□□□□ -0.75
P04946 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04946 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.33□□□□□ -0.76
P04946 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04946 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04946 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
P04946 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04946 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04946 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04946 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms