Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.5□□□□□ -0.41
PrnpP04925 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.5□□□□□ -0.41
PrnpP04925 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PrnpP04925 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
PrnpP04925 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.49□□□□□ -0.41
PrnpP04925 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Gm22442-201ENSMUST00000157256 144 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Gm24844-201ENSMUST00000158679 127 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
PrnpP04925 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PrnpP04925 Gm3551-201ENSMUST00000190750 664 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.49□□□□□ -0.41
PrnpP04925 Gm2875-201ENSMUST00000211333 360 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PrnpP04925 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.49□□□□□ -0.41
PrnpP04925 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.49□□□□□ -0.41
PrnpP04925 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.49□□□□□ -0.41
PrnpP04925 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.49□□□□□ -0.41
PrnpP04925 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.49□□□□□ -0.41
PrnpP04925 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PrnpP04925 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
PrnpP04925 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
PrnpP04925 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PrnpP04925 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PrnpP04925 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.48□□□□□ -0.41
PrnpP04925 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.48□□□□□ -0.41
PrnpP04925 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Gm12899-201ENSMUST00000120565 551 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Gm3150-201ENSMUST00000166418 204 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
PrnpP04925 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Gm17877-201ENSMUST00000192578 814 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.48□□□□□ -0.41
PrnpP04925 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.48□□□□□ -0.41
PrnpP04925 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.48□□□□□ -0.41
PrnpP04925 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.48□□□□□ -0.41
PrnpP04925 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
PrnpP04925 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PrnpP04925 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PrnpP04925 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PrnpP04925 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PrnpP04925 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PrnpP04925 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PrnpP04925 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.47□□□□□ -0.41
PrnpP04925 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PrnpP04925 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.47□□□□□ -0.41
PrnpP04925 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms